Issues

• Add multimapper cCREs for human and mouse

  weng-lab/SCREEN2.0#623 · Filter by author NishiPhalke opened on Oct 10, 2025

• Update citation to new paper

  weng-lab/SCREEN2.0#601 · Filter by author jpfisher72 opened on Jun 26, 2025

• SCREEN review comments fixes: Add screen genome browser tracks url downloads on download page

  weng-lab/SCREEN2.0#589 · Filter by author NishiPhalke opened on Apr 30, 2025
  

• SCREEN review comments fixes: Update downloads page to add subtissue categories and offer corresponding cCRE downloads

  weng-lab/SCREEN2.0#584 · Filter by author NishiPhalke opened on Apr 30, 2025

• Searching "registry of candidate cis-regulatory elements" on google only brings up old site

  weng-lab/SCREEN2.0#576 · Filter by author jpfisher72 opened on Apr 3, 2025

• biosampleTables - search and then select all is broken

  weng-lab/SCREEN2.0#573 · Filter by author jpfisher72 opened on Mar 13, 2025

• Configure code formatting and linting

  enhancement
  Feature

  weng-lab/SCREEN2.0#567 · Filter by author JaiiR320 opened on Feb 27, 2025
  

• Can Remove mui/lab as dependency

  weng-lab/SCREEN2.0#564 · Filter by author jpfisher72 opened on Feb 21, 2025

• Standardize assembly casing in apis / add descriptions for accepted values

  weng-lab/SCREEN2.0#560 · Filter by author riyavsinha opened on Feb 18, 2025
  2

• Remove "Only" from "CA-only" and "Chromatin Accessible Only" throughout site

  weng-lab/SCREEN2.0#555 · Filter by author jpfisher72 opened on Feb 11, 2025

• Clicking on cCRE in GenomeBrowser sometimes results in an empty tab

  bug
  Bug

  weng-lab/SCREEN2.0#554 · Filter by author JaiiR320 opened on Feb 11, 2025
  

• ENCODE Search Parsing - handle whitespace characters

  weng-lab/SCREEN2.0#552 · Filter by author jpfisher72 opened on Feb 4, 2025

• Vercel Analytics - searchParams and referrer is too long to be properly tracked

  weng-lab/SCREEN2.0#550 · Filter by author jpfisher72 opened on Jan 29, 2025
  

• Add support for selecting multiple biosamples in gbview tab

  enhancement
  weng-lab/SCREEN2.0#540 · Filter by author jpfisher72 opened on Jan 7, 2025

• Expand search functionality in GB View

  enhancement
  weng-lab/SCREEN2.0#538 · Filter by author JaiiR320 opened on Jan 2, 2025
  

• Remove reliance on coordinates in url parameters

  enhancement
  weng-lab/SCREEN2.0#523 · Filter by author jpfisher72 opened on Dec 19, 2024
  

• Bar Plot, better handle TPM values of 0

  weng-lab/SCREEN2.0#522 · Filter by author jpfisher72 opened on Dec 19, 2024
  

• Should be able to search by Gene ID in addition to name

  enhancement
  weng-lab/SCREEN2.0#519 · Filter by author jpfisher72 opened on Dec 18, 2024
  

• Footer displays behind the sidebar

  weng-lab/SCREEN2.0#517 · Filter by author jpfisher72 opened on Dec 16, 2024

• Pages which fetch data need to have more graceful error handling

  weng-lab/SCREEN2.0#481 · Filter by author jpfisher72 opened on Oct 25, 2024

• CodeQL and Analyze are not properly running on Dependabot PRs

  weng-lab/SCREEN2.0#347 · Filter by author jpfisher72 opened on Jun 11, 2024
  

• Implement proper loading transitions

  enhancement
  weng-lab/SCREEN2.0#345 · Filter by author jpfisher72 opened on Jun 11, 2024
  

• Make it so users can just press enter after typing in search (without selecting an option)

  bugenhancement
  weng-lab/SCREEN2.0#337 · Filter by author jpfisher72 opened on May 29, 2024
  

• Should put safeguards in against people/bots spamming features which generate files

  enhancement
  weng-lab/SCREEN2.0#306 · Filter by author jpfisher72 opened on Feb 29, 2024

• cCRE query should only include fields it truly needs

  performance
  weng-lab/SCREEN2.0#272 · Filter by author jpfisher72 opened on Jan 25, 2024