SciLifeLab BioImage Informatics Facility
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steinbock-webinar
steinbock-webinar Publicsteinbock: a toolkit for processing multiplexed tissue images
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I2K2024-MTIWorkshop
I2K2024-MTIWorkshop PublicMaterial for the I2K 2024 "Multiplexed tissue imaging: tools and approaches" workshop
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MariaUlvmar2020-1
MariaUlvmar2020-1 PublicHEV Finder: an automated image analysis tool to recognize and characterize changes of the vasculature in biobank lymph node samples from patients with different types of cancer and invasiveness
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EduardoVillablanca2023-1
EduardoVillablanca2023-1 PublicSegmentation of ducts in histology tissue using the NoCodeSeg pipeline
Jupyter Notebook 3
Repositories
- 8376_minflux Public
A desktop GUI for loading, filtering, visualizing, aligning, clustering, and exporting MINFLUX localization data.
- Webinar_ImageRegistration_Mar2026 Public
It contains the Jupyter Notebook that was used during the webinar demonstration and the presentation slides
- ChristelBergstrom2024-1 Public
- 8134_amyloid_formation Public
- LCI_Workshop Public Forked from giselehbm/LCI_Workshop_2023
Image Analysis workshop of the LCI Microscopy course
- pipex_bigfish Public Forked from CellProfiling/pipex
A pipeline to transform images into valuable analysis items
- SLU2025-AI4BIA Public
Lecture material for "AI tools in biology" at SLU 2025: "AI and image analysis"
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