Issues

• Error when running PCAWG pipeline

  ICGC-TCGA-PanCancer/Seqware-BWA-Workflow#27 · Filter by author ashraf123456789 opened on Aug 9, 2023

• Remove unneeded params in CWL

  ICGC-TCGA-PanCancer/Seqware-BWA-Workflow#23 · Filter by author junjun-zhang opened on Apr 5, 2019

• add doc to checker-workflow-wrapping-workflow.cwl

  ICGC-TCGA-PanCancer/Seqware-BWA-Workflow#17 · Filter by author junjun-zhang opened on Sep 21, 2018
  

• Test next version of Seqware-BWA-Workflow with new reference data

  ICGC-TCGA-PanCancer/Seqware-BWA-Workflow#14 · Filter by author denis-yuen opened on Feb 23, 2017

• running this workflow using new configuration file

  ICGC-TCGA-PanCancer/Seqware-BWA-Workflow#9 · Filter by author manuelgarvan opened on Aug 8, 2016

• No way to override '-T 0' in bwa mem

  ICGC-TCGA-PanCancer/Seqware-BWA-Workflow#8 · Filter by author keiranmraine opened on May 4, 2016

• when add autodie to gnos_upload_data.pl error is thown

  ICGC-TCGA-PanCancer/Seqware-BWA-Workflow#2 · Filter by author adamjohnwright opened on Jul 29, 2015
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