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33 Commits

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Name		Name	Last commit message	Last commit date
10mer		10mer
10mer_2019		10mer_2019
10mer_membow		10mer_membow
10mer_membow_2019		10mer_membow_2019
MI		MI
plots		plots
.DS_Store		.DS_Store
.Rapp.history		.Rapp.history
.Rhistory		.Rhistory
10mearLoadData.R		10mearLoadData.R
10mer_2019.R		10mer_2019.R
10mer_2019v2.R		10mer_2019v2.R
Load10mer_data.R		Load10mer_data.R
Load10mer_data.membow.R		Load10mer_data.membow.R
LoadMembow2		LoadMembow2
LoadMembow2.R		LoadMembow2.R
LoadMembow_2019.R		LoadMembow_2019.R
Pos21.csv		Pos21.csv
Pos31_1.csv		Pos31_1.csv
Pos31_1.nwk		Pos31_1.nwk
Pos31_2.csv		Pos31_2.csv
Pos31_2.nwk		Pos31_2.nwk
Pos32.csv		Pos32.csv
Pos33.csv		Pos33.csv
Pos34.csv		Pos34.csv
Pos35.csv		Pos35.csv
Pos37.csv		Pos37.csv
Pos39.csv		Pos39.csv
Pos40.csv		Pos40.csv
README.md		README.md
RF.experiment.R		RF.experiment.R
barcodeDist_tree21_allcells.pdf		barcodeDist_tree21_allcells.pdf
barcodeDist_tree31_2.pdf		barcodeDist_tree31_2.pdf
barcodeDist_tree31_2_allcells.pdf		barcodeDist_tree31_2_allcells.pdf
cluster.membow.R		cluster.membow.R
compareBarcodeDist_tree31_2.pdf		compareBarcodeDist_tree31_2.pdf
loadData.R		loadData.R
manualDist.R		manualDist.R
membow.ecdf.pdf		membow.ecdf.pdf
membow_21tree.pdf		membow_21tree.pdf
membow_31_2tree.pdf		membow_31_2tree.pdf
membow_31_2treeHORIZ.pdf		membow_31_2treeHORIZ.pdf
membow_31_2tree_7groupsHORZ.pdf		membow_31_2tree_7groupsHORZ.pdf
plotFunctions.R		plotFunctions.R
pos1_cont.csv		pos1_cont.csv
pos1_cont.fas		pos1_cont.fas
pos1_cont.fas.bak		pos1_cont.fas.bak
pos1_cont.nwk		pos1_cont.nwk
pos21.fas		pos21.fas
pos21.fas.bak		pos21.fas.bak
pos21.nwk		pos21.nwk
pos31_1.fas		pos31_1.fas
pos31_1.fas.bak		pos31_1.fas.bak
pos31_2.fas		pos31_2.fas
pos31_2.fas.bak		pos31_2.fas.bak
pos31_2_barcodes.R		pos31_2_barcodes.R
pos32.fas		pos32.fas
pos32.fas.bak		pos32.fas.bak
pos32.nwk		pos32.nwk
pos33.fas		pos33.fas
pos33.fas.bak		pos33.fas.bak
pos33.nwk		pos33.nwk
pos34.fas		pos34.fas
pos34.fas.bak		pos34.fas.bak
pos34.nwk		pos34.nwk
pos35.fas		pos35.fas
pos35.fas.bak		pos35.fas.bak
pos35.nwk		pos35.nwk
pos37.fas		pos37.fas
pos37.fas.bak		pos37.fas.bak
pos37.nwk		pos37.nwk
pos39.fas		pos39.fas
pos39.fas.bak		pos39.fas.bak
pos39.nwk		pos39.nwk
pos40.fas		pos40.fas
pos40.fas.bak		pos40.fas.bak
pos40.nwk		pos40.nwk
pos41.nwk		pos41.nwk
pos4_cont.csv		pos4_cont.csv
pos4_cont.fas		pos4_cont.fas
pos4_cont.fas.bak		pos4_cont.fas.bak
pos5_cont.csv		pos5_cont.csv
pos5_cont.fas		pos5_cont.fas
pos5_cont.fas.bak		pos5_cont.fas.bak
pos6_cont.csv		pos6_cont.csv
pos6_cont.fas		pos6_cont.fas
pos6_cont.fas.bak		pos6_cont.fas.bak
pos8_cont.csv		pos8_cont.csv
pos8_cont.fas		pos8_cont.fas
pos8_cont.fas.bak		pos8_cont.fas.bak
realTreeBarcodes_tree21.pdf		realTreeBarcodes_tree21.pdf
realTreeWithBarcodes.pdf		realTreeWithBarcodes.pdf
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